Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP001350.2-201ENST00000625104 1094 ntBASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 AC022532.1-201ENST00000624563 1728 ntBASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC44A1Q8WWI5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 AC005412.3-201ENST00000580309 715 ntBASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC44A1Q8WWI5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 HCG4-201ENST00000418983 998 ntBASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 AC093458.2-201ENST00000623150 629 ntBASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC44A1Q8WWI5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC44A1Q8WWI5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SLC44A1Q8WWI5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC44A1Q8WWI5 AC144831.1-201ENST00000573312 2656 ntBASIC16.58■□□□□ 0.25
SLC44A1Q8WWI5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC44A1Q8WWI5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms