Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 GPAA1P2-202ENST00000606848 1787 ntBASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 GUSBP12-201ENST00000513727 720 ntBASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 AL441883.1-201ENST00000566170 1045 ntBASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM4Q8WVI0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 SNX18-202ENST00000343017 3140 ntBASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 RNF126P1-202ENST00000569893 925 ntBASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 AC010654.1-201ENST00000615722 808 ntBASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 TOP3BP1-201ENST00000420768 1380 ntBASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 AC243591.1-201ENST00000452967 1364 ntBASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM4Q8WVI0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms