Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 FAM86MP-201ENST00000340703 885 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 BNIP3P42-201ENST00000454982 569 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC104596.2-201ENST00000512793 793 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC104989.1-201ENST00000519711 778 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 MIR4321-201ENST00000592276 80 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 BNIP3P29-201ENST00000598302 571 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC011447.5-201ENST00000616168 564 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 Z97205.2-201ENST00000564697 1639 ntBASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KLHDC9Q8NEP7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 RN7SL399P-201ENST00000471648 279 ntBASIC18■□□□□ 0.47
KLHDC9Q8NEP7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KLHDC9Q8NEP7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 MIR4525-201ENST00000580000 75 ntBASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms