Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 AL031055.1-201ENST00000606362 631 ntBASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 GGT3P-204ENST00000453783 1664 ntBASIC14.49□□□□□ -0.09
CPEB3Q8NE35 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 PMS2P4-201ENST00000412466 1052 ntBASIC14.49□□□□□ -0.09
CPEB3Q8NE35 AC140658.5-201ENST00000438532 169 ntBASIC14.49□□□□□ -0.09
CPEB3Q8NE35 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 GPAA1P2-202ENST00000606848 1787 ntBASIC14.49□□□□□ -0.09
CPEB3Q8NE35 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.49□□□□□ -0.09
CPEB3Q8NE35 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AL662844.4-201ENST00000606367 2838 ntBASIC14.48□□□□□ -0.09
CPEB3Q8NE35 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AC040169.1-201ENST00000565382 521 ntBASIC14.48□□□□□ -0.09
CPEB3Q8NE35 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 MIR3909-201ENST00000579518 119 ntBASIC14.48□□□□□ -0.09
CPEB3Q8NE35 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AL009183.1-201ENST00000603760 355 ntBASIC14.48□□□□□ -0.09
CPEB3Q8NE35 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms