Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 FRMD8P1-201ENST00000440433 1524 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 AC104596.2-201ENST00000512793 793 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 PTP4A1P2-201ENST00000546033 454 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 AC026979.3-201ENST00000607315 403 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 AL391069.4-201ENST00000609583 481 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 MIR6069-201ENST00000620069 79 ntBASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCDC168Q8NDH2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 EGFEM1P-202ENST00000431685 1563 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC007969.1-201ENST00000433675 447 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 RNA5SP410-201ENST00000516285 106 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC026740.1-201ENST00000607068 791 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AL021920.2-201ENST00000624828 1351 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 KRT18P55-202ENST00000578578 1546 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC004898.1-201ENST00000451057 766 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 RN7SL399P-201ENST00000471648 279 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 SCARNA20.5-201ENST00000516991 142 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 DUX4L45-201ENST00000566406 1057 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 AC036164.1-201ENST00000570544 333 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 MIR5572-201ENST00000583188 137 ntBASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC168Q8NDH2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 AC091804.1-201ENST00000486888 567 ntBASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CCDC168Q8NDH2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms