Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 AC020765.3-201ENST00000613051 740 ntBASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 MIR7706-201ENST00000613747 67 ntBASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LSMEM1Q8N8F7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 AC092910.1-201ENST00000482027 1129 ntBASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 CXCL1P1-201ENST00000502804 216 ntBASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 KRT126P-201ENST00000549467 1181 ntBASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSMEM1Q8N8F7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSMEM1Q8N8F7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms