Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PAF1Q8N7H5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 AC107918.2-201ENST00000530817 355 ntBASIC17.03■□□□□ 0.32
PAF1Q8N7H5 AC091167.2-201ENST00000579581 588 ntBASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 AL671883.3-201ENST00000603274 991 ntBASIC17.03■□□□□ 0.32
PAF1Q8N7H5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PAF1Q8N7H5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 AC131009.4-201ENST00000624048 1740 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 KRT18P13-201ENST00000400056 1290 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 DNAJB3-201ENST00000446806 729 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 KRT19P2-202ENST00000557173 1012 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 AC087641.1-201ENST00000557561 1021 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 ACTL9-202ENST00000612068 1252 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 AL513190.1-201ENST00000621254 727 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PAF1Q8N7H5 AC005915.1-201ENST00000624912 2018 ntBASIC17.02■□□□□ 0.32
PAF1Q8N7H5 MYO15B-237ENST00000642007 4893 ntBASIC17.02■□□□□ 0.31
PAF1Q8N7H5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PAF1Q8N7H5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PAF1Q8N7H5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms