Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MIR648-201ENST00000385046 94 ntBASIC13.38□□□□□ -0.27
LINC00311Q8N616 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AC004832.2-201ENST00000426397 482 ntBASIC13.38□□□□□ -0.27
LINC00311Q8N616 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 FAM86C2P-203ENST00000528684 1004 ntBASIC13.38□□□□□ -0.27
LINC00311Q8N616 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AC092364.2-201ENST00000596710 2692 ntBASIC13.38□□□□□ -0.27
LINC00311Q8N616 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00311Q8N616 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00311Q8N616 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 ACTG1P14-201ENST00000446382 1122 ntBASIC13.37□□□□□ -0.27
LINC00311Q8N616 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 PRYP6-201ENST00000514804 343 ntBASIC13.37□□□□□ -0.27
LINC00311Q8N616 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 AC073389.1-201ENST00000595595 795 ntBASIC13.37□□□□□ -0.27
LINC00311Q8N616 AL365330.1-201ENST00000607459 531 ntBASIC13.37□□□□□ -0.27
LINC00311Q8N616 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 AC073439.1-201ENST00000624121 1774 ntBASIC13.37□□□□□ -0.27
LINC00311Q8N616 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00311Q8N616 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00311Q8N616 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 AC023274.1-201ENST00000418278 595 ntBASIC13.36□□□□□ -0.27
LINC00311Q8N616 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 MTDHP5-201ENST00000598980 586 ntBASIC13.36□□□□□ -0.27
LINC00311Q8N616 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00311Q8N616 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00311Q8N616 AC091812.2-201ENST00000619081 385 ntBASIC13.36□□□□□ -0.27
LINC00311Q8N616 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms