Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC027612.4-201ENST00000605371 583 ntBASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AC009093.7-201ENST00000623853 1223 ntBASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 PCDHA14-201ENST00000506751 2298 ntBASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AC098859.1-201ENST00000502915 1238 ntBASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 SPTSSB-204ENST00000617024 1292 ntBASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAM1L1Q8N609 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 FOXO1B-201ENST00000504678 1527 ntBASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 U82695.1-201ENST00000635752 1889 ntBASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 FAM58DP-201ENST00000428076 619 ntBASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAM1L1Q8N609 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms