Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AL035633.1-201ENST00000406139 838 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AC055876.3-201ENST00000431496 288 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 KLF2P3-201ENST00000451977 1087 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AC027307.2-201ENST00000591252 911 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AC138649.4-201ENST00000612222 287 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AP001350.2-201ENST00000625104 1094 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 AL162727.3-201ENST00000635661 2787 ntBASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PHTF2Q8N3S3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AL021920.2-201ENST00000624828 1351 ntBASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AL138918.1-201ENST00000568306 659 ntBASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AC079328.2-201ENST00000561241 3354 ntBASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AL603756.1-201ENST00000606511 2163 ntBASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PHTF2Q8N3S3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.07■□□□□ 0.32
PHTF2Q8N3S3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms