Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 AC006277.1-201ENST00000624348 1610 ntBASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM48Q8IWZ4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC022211.2-201ENST00000585075 2527 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 TSEN15P1-201ENST00000423257 515 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC023141.5-201ENST00000458585 616 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC079140.1-201ENST00000508039 487 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC004449.1-201ENST00000564240 433 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC027612.4-201ENST00000605371 583 ntBASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM48Q8IWZ4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
TRIM48Q8IWZ4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM48Q8IWZ4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM48Q8IWZ4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM48Q8IWZ4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM48Q8IWZ4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms