Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AL603832.2-201ENST00000566195 2125 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 MIR5100-201ENST00000579544 119 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AC104692.2-201ENST00000603054 253 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AL591684.3-201ENST00000605187 298 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AC114341.1-201ENST00000618070 349 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AC073592.5-201ENST00000624854 528 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AL139011.1-202ENST00000642063 584 ntBASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CRLF3Q8IUI8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 FDX1P1-201ENST00000449115 551 ntBASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 REXO1L6P-202ENST00000619970 1078 ntBASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 AD001527.2-201ENST00000622994 785 ntBASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 TP73-AS1-210ENST00000637775 1455 ntBASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CRLF3Q8IUI8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CRLF3Q8IUI8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms