Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AC211429.1-201ENST00000415277 523 ntBASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AC064862.7-201ENST00000604520 867 ntBASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 REXO1L3P-201ENST00000622202 1288 ntBASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AL121956.5-201ENST00000625261 221 ntBASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 AL031133.1-201ENST00000406807 723 ntBASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 NCF1C-201ENST00000438382 1427 ntBASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 LINC02228-204ENST00000642115 2962 ntBASIC14.4□□□□□ -0.1
LRRTM1Q86UE6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
LRRTM1Q86UE6 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.4□□□□□ -0.11
LRRTM1Q86UE6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRTM1Q86UE6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms