Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC006277.1-201ENST00000624348 1610 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 DGCR5-201ENST00000399539 862 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 GIMAP3P-201ENST00000495150 836 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 NKILA-202ENST00000614771 2598 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 GK-202ENST00000378941 458 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AC132938.2-201ENST00000579188 680 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AL589739.1-201ENST00000607720 493 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 AL591163.1-201ENST00000641757 987 ntBASIC13.98□□□□□ -0.17
RAI1Q7Z5J4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 PRORSD1P-202ENST00000563365 2154 ntBASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 AC024267.1-201ENST00000582320 895 ntBASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 AC007431.3-201ENST00000623221 587 ntBASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAI1Q7Z5J4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
RAI1Q7Z5J4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAI1Q7Z5J4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms