Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 AC068880.1-201ENST00000507289 2297 ntBASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC149Q6ZUS6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 AL023806.1-201ENST00000603994 1649 ntBASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 RPL37AP1-201ENST00000412502 279 ntBASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 AL844908.2-201ENST00000609461 460 ntBASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC149Q6ZUS6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 API5-211ENST00000534695 560 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AL079307.3-201ENST00000556114 283 ntBASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC149Q6ZUS6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms