Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 AC092552.1-201ENST00000547243 906 ntBASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 AC010319.3-201ENST00000597028 470 ntBASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.58■□□□□ 0.41
CNKSR3Q6P9H4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CNKSR3Q6P9H4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.58■□□□□ 0.41
CNKSR3Q6P9H4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.58■□□□□ 0.41
CNKSR3Q6P9H4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.58■□□□□ 0.41
CNKSR3Q6P9H4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 HIST3H2BA-201ENST00000436555 524 ntBASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 MIR4525-201ENST00000580000 75 ntBASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 BTNL10-201ENST00000595971 695 ntBASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 GGT4P-201ENST00000623672 1708 ntBASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNKSR3Q6P9H4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 AL645728.1-201ENST00000366221 2101 ntBASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 AC138932.1-201ENST00000534164 6830 ntBASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 FAM86MP-201ENST00000340703 885 ntBASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 CYP4F24P-201ENST00000586049 1580 ntBASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNKSR3Q6P9H4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms