Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
MRPL54Q6P161 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL54Q6P161 AC002310.6-201ENST00000624451 1377 ntBASIC12.55□□□□□ -0.4
MRPL54Q6P161 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 KRT89P-201ENST00000620027 1478 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 AL359258.3-201ENST00000622910 2331 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CCR12P-201ENST00000446203 998 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 LINC02447-202ENST00000501888 2146 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
MRPL54Q6P161 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CDC14C-201ENST00000428251 1719 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
MRPL54Q6P161 AC092338.2-201ENST00000568827 1415 ntBASIC12.54□□□□□ -0.4
MRPL54Q6P161 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AC138969.2-201ENST00000532739 9932 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 LINC00895-201ENST00000629028 1637 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 CICP24-201ENST00000605464 2705 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AC009947.2-201ENST00000444014 672 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 C1QBPP2-201ENST00000528754 825 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms