Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AC114341.1-201ENST00000618070 349 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 GPAA1P2-202ENST00000606848 1787 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 NSUN5P1-202ENST00000421140 1535 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 NSUN5P2-203ENST00000457352 1529 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 KRT18P1-202ENST00000452408 1331 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 AC016734.2-201ENST00000624325 1377 ntBASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 AC013268.4-201ENST00000637413 2228 ntBASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ABCD1P5-201ENST00000445663 754 ntBASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 KRT17P6-201ENST00000453795 1220 ntBASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00242Q5T6M2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.33□□□□□ -0.59
LINC00242Q5T6M2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.59
LINC00242Q5T6M2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC00242Q5T6M2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
LINC00242Q5T6M2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms