Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COBLL1Q53SF7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COBLL1Q53SF7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.11■□□□□ 0.49
COBLL1Q53SF7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.11■□□□□ 0.49
COBLL1Q53SF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COBLL1Q53SF7 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.11■□□□□ 0.49
COBLL1Q53SF7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COBLL1Q53SF7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC104109.2-201ENST00000602919 1418 ntBASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC025580.3-201ENST00000617932 1424 ntBASIC18.1■□□□□ 0.49
COBLL1Q53SF7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC245100.5-201ENST00000452108 331 ntBASIC18.1■□□□□ 0.49
COBLL1Q53SF7 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 KRT19P2-202ENST00000557173 1012 ntBASIC18.1■□□□□ 0.49
COBLL1Q53SF7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 AC004877.2-201ENST00000623941 599 ntBASIC18.1■□□□□ 0.49
COBLL1Q53SF7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COBLL1Q53SF7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 KRT18P2-201ENST00000447938 1258 ntBASIC18.09■□□□□ 0.49
COBLL1Q53SF7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COBLL1Q53SF7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
COBLL1Q53SF7 BCAR1-209ENST00000546196 1340 ntBASIC18.08■□□□□ 0.49
COBLL1Q53SF7 AC079328.2-201ENST00000561241 3354 ntBASIC18.08■□□□□ 0.48
COBLL1Q53SF7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COBLL1Q53SF7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COBLL1Q53SF7 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.08■□□□□ 0.48
COBLL1Q53SF7 FDX1P1-201ENST00000449115 551 ntBASIC18.08■□□□□ 0.48
COBLL1Q53SF7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms