Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.97■□□□□ 0.15
PCDH1Q08174 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH1Q08174 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH1Q08174 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH1Q08174 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDH1Q08174 AC023141.13-201ENST00000604991 943 ntBASIC15.97■□□□□ 0.15
PCDH1Q08174 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH1Q08174 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDH1Q08174 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH1Q08174 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDH1Q08174 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PCDH1Q08174 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 AC140658.5-201ENST00000438532 169 ntBASIC15.96■□□□□ 0.15
PCDH1Q08174 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH1Q08174 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH1Q08174 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH1Q08174 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PCDH1Q08174 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 AL009183.1-201ENST00000603760 355 ntBASIC15.96■□□□□ 0.15
PCDH1Q08174 BX640515.1-201ENST00000617215 977 ntBASIC15.96■□□□□ 0.15
PCDH1Q08174 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH1Q08174 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH1Q08174 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDH1Q08174 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH1Q08174 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDH1Q08174 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH1Q08174 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
PCDH1Q08174 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH1Q08174 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDH1Q08174 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDH1Q08174 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDH1Q08174 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDH1Q08174 IL9RP2-201ENST00000423948 1312 ntBASIC15.95■□□□□ 0.14
PCDH1Q08174 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDH1Q08174 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 AC104109.2-201ENST00000602919 1418 ntBASIC15.95■□□□□ 0.14
PCDH1Q08174 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH1Q08174 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDH1Q08174 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH1Q08174 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PCDH1Q08174 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.95■□□□□ 0.14
PCDH1Q08174 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH1Q08174 RPL13AP23-201ENST00000480739 586 ntBASIC15.95■□□□□ 0.14
PCDH1Q08174 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDH1Q08174 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.95■□□□□ 0.14
PCDH1Q08174 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH1Q08174 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms