Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 AC022532.1-201ENST00000624563 1728 ntBASIC11.75□□□□□ -0.53
RPL39P62891 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 REXO1L8P-201ENST00000604378 1897 ntBASIC11.75□□□□□ -0.53
RPL39P62891 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.75□□□□□ -0.53
RPL39P62891 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 AP002414.1-201ENST00000391405 1147 ntBASIC11.75□□□□□ -0.53
RPL39P62891 AC117947.1-201ENST00000427448 529 ntBASIC11.75□□□□□ -0.53
RPL39P62891 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
RPL39P62891 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.75□□□□□ -0.53
RPL39P62891 HYMAI.1-201ENST00000620949 238 ntBASIC11.75□□□□□ -0.53
RPL39P62891 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.75□□□□□ -0.53
RPL39P62891 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 TSPY22P-201ENST00000427496 604 ntBASIC11.74□□□□□ -0.53
RPL39P62891 BX664615.1-201ENST00000443558 458 ntBASIC11.74□□□□□ -0.53
RPL39P62891 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.74□□□□□ -0.53
RPL39P62891 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.74□□□□□ -0.53
RPL39P62891 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 AC009533.2-201ENST00000543664 586 ntBASIC11.74□□□□□ -0.53
RPL39P62891 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.74□□□□□ -0.53
RPL39P62891 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.74□□□□□ -0.53
RPL39P62891 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms