Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.26□□□□□ -0.13
AP3S2P59780 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 GPR32P1-201ENST00000601788 811 ntBASIC14.26□□□□□ -0.13
AP3S2P59780 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AP3S2P59780 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.26□□□□□ -0.13
AP3S2P59780 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AP3S2P59780 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AP3S2P59780 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.26□□□□□ -0.13
AP3S2P59780 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AP3S2P59780 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S2P59780 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S2P59780 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S2P59780 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S2P59780 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
AP3S2P59780 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AP3S2P59780 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.25□□□□□ -0.13
AP3S2P59780 RASA4DP-201ENST00000460726 1199 ntBASIC14.25□□□□□ -0.13
AP3S2P59780 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S2P59780 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S2P59780 AC233702.5-201ENST00000584107 538 ntBASIC14.25□□□□□ -0.13
AP3S2P59780 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
AP3S2P59780 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.25□□□□□ -0.13
AP3S2P59780 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.25□□□□□ -0.13
AP3S2P59780 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AP3S2P59780 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AP3S2P59780 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
AP3S2P59780 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.25□□□□□ -0.13
AP3S2P59780 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
AP3S2P59780 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AP3S2P59780 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AP3S2P59780 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.24□□□□□ -0.13
AP3S2P59780 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 MIR648-201ENST00000385046 94 ntBASIC14.24□□□□□ -0.13
AP3S2P59780 HMGA1P5-201ENST00000412453 271 ntBASIC14.24□□□□□ -0.13
AP3S2P59780 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.24□□□□□ -0.13
AP3S2P59780 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.24□□□□□ -0.13
AP3S2P59780 AP000525.1-201ENST00000608286 694 ntBASIC14.24□□□□□ -0.13
AP3S2P59780 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 AC006486.2-201ENST00000624246 2199 ntBASIC14.24□□□□□ -0.13
AP3S2P59780 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
AP3S2P59780 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP3S2P59780 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms