Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.4■□□□□ 0.06
PER3P56645 BASP1P1-201ENST00000430708 665 ntBASIC15.4■□□□□ 0.06
PER3P56645 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.4■□□□□ 0.06
PER3P56645 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.4■□□□□ 0.06
PER3P56645 AC015911.4-201ENST00000588022 1070 ntBASIC15.4■□□□□ 0.06
PER3P56645 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 PI4KAP1-204ENST00000612579 1703 ntBASIC15.4■□□□□ 0.06
PER3P56645 AGGF1P2-201ENST00000426656 2106 ntBASIC15.4■□□□□ 0.06
PER3P56645 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.39■□□□□ 0.05
PER3P56645 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 AC002056.1-201ENST00000395613 760 ntBASIC15.39■□□□□ 0.05
PER3P56645 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.39■□□□□ 0.05
PER3P56645 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.39■□□□□ 0.05
PER3P56645 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PER3P56645 AC109322.1-201ENST00000524499 1264 ntBASIC15.39■□□□□ 0.05
PER3P56645 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.39■□□□□ 0.05
PER3P56645 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 LINC01451-201ENST00000623792 534 ntBASIC15.39■□□□□ 0.05
PER3P56645 AL035252.4-201ENST00000624174 288 ntBASIC15.39■□□□□ 0.05
PER3P56645 Z92544.3-201ENST00000624747 417 ntBASIC15.39■□□□□ 0.05
PER3P56645 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.39■□□□□ 0.05
PER3P56645 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PER3P56645 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PER3P56645 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PER3P56645 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.39■□□□□ 0.05
PER3P56645 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.39■□□□□ 0.05
PER3P56645 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PER3P56645 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
PER3P56645 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PER3P56645 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PER3P56645 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.38■□□□□ 0.05
PER3P56645 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.38■□□□□ 0.05
PER3P56645 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.38■□□□□ 0.05
PER3P56645 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.38■□□□□ 0.05
PER3P56645 ACTG1P4-201ENST00000425123 1122 ntBASIC15.38■□□□□ 0.05
PER3P56645 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.38■□□□□ 0.05
PER3P56645 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.38■□□□□ 0.05
PER3P56645 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PER3P56645 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.38■□□□□ 0.05
PER3P56645 TERF1P3-201ENST00000505638 1227 ntBASIC15.38■□□□□ 0.05
PER3P56645 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.38■□□□□ 0.05
PER3P56645 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms