Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUP98P52948 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
NUP98P52948 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NUP98P52948 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.25■□□□□ 0.83
NUP98P52948 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.25■□□□□ 0.83
NUP98P52948 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NUP98P52948 RARRES2P5-201ENST00000564013 466 ntBASIC20.25■□□□□ 0.83
NUP98P52948 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NUP98P52948 TMEM261P1-201ENST00000604899 340 ntBASIC20.25■□□□□ 0.83
NUP98P52948 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NUP98P52948 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP98P52948 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.24■□□□□ 0.83
NUP98P52948 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 LINC01144-201ENST00000626198 1710 ntBASIC20.24■□□□□ 0.83
NUP98P52948 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
NUP98P52948 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.24■□□□□ 0.83
NUP98P52948 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NUP98P52948 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.24■□□□□ 0.83
NUP98P52948 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.24■□□□□ 0.83
NUP98P52948 KRT17P8-201ENST00000540749 863 ntBASIC20.24■□□□□ 0.83
NUP98P52948 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.24■□□□□ 0.83
NUP98P52948 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.24■□□□□ 0.83
NUP98P52948 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.24■□□□□ 0.83
NUP98P52948 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NUP98P52948 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP98P52948 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
NUP98P52948 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
NUP98P52948 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 FO393414.2-201ENST00000405153 598 ntBASIC20.23■□□□□ 0.83
NUP98P52948 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.23■□□□□ 0.83
NUP98P52948 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.23■□□□□ 0.83
NUP98P52948 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.23■□□□□ 0.83
NUP98P52948 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
NUP98P52948 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUP98P52948 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
NUP98P52948 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.23■□□□□ 0.83
NUP98P52948 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.23■□□□□ 0.83
NUP98P52948 POU5F1P6-201ENST00000466990 990 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms