Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.42■□□□□ 0.7
NEDD4P46934 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4P46934 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4P46934 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.42■□□□□ 0.7
NEDD4P46934 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.42■□□□□ 0.7
NEDD4P46934 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4P46934 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4P46934 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4P46934 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NEDD4P46934 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NEDD4P46934 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 AC005622.1-201ENST00000636801 1703 ntBASIC19.41■□□□□ 0.7
NEDD4P46934 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.41■□□□□ 0.7
NEDD4P46934 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.41■□□□□ 0.7
NEDD4P46934 KRT8P23-201ENST00000560090 1207 ntBASIC19.41■□□□□ 0.7
NEDD4P46934 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.41■□□□□ 0.7
NEDD4P46934 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.41■□□□□ 0.7
NEDD4P46934 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.41■□□□□ 0.7
NEDD4P46934 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.41■□□□□ 0.7
NEDD4P46934 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.41■□□□□ 0.7
NEDD4P46934 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEDD4P46934 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4P46934 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.41■□□□□ 0.7
NEDD4P46934 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.4■□□□□ 0.7
NEDD4P46934 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.4■□□□□ 0.7
NEDD4P46934 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4P46934 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
NEDD4P46934 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4P46934 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4P46934 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4P46934 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.4■□□□□ 0.7
NEDD4P46934 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.4■□□□□ 0.7
NEDD4P46934 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.4■□□□□ 0.7
NEDD4P46934 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4P46934 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NEDD4P46934 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4P46934 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
NEDD4P46934 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEDD4P46934 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEDD4P46934 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEDD4P46934 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
NEDD4P46934 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4P46934 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4P46934 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NEDD4P46934 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4P46934 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.39■□□□□ 0.69
NEDD4P46934 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4P46934 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.39■□□□□ 0.69
NEDD4P46934 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.39■□□□□ 0.69
NEDD4P46934 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.39■□□□□ 0.69
NEDD4P46934 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.39■□□□□ 0.69
NEDD4P46934 AC079781.4-201ENST00000641908 219 ntBASIC19.39■□□□□ 0.69
NEDD4P46934 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NEDD4P46934 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4P46934 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4P46934 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms