Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GDNFP39905 AC067930.6-201ENST00000623257 4947 ntBASIC14.48□□□□□ -0.09
GDNFP39905 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GDNFP39905 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
GDNFP39905 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
GDNFP39905 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.47□□□□□ -0.09
GDNFP39905 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 MINOS1P3-201ENST00000457048 203 ntBASIC14.47□□□□□ -0.09
GDNFP39905 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.47□□□□□ -0.09
GDNFP39905 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.47□□□□□ -0.09
GDNFP39905 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.47□□□□□ -0.09
GDNFP39905 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.47□□□□□ -0.09
GDNFP39905 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDNFP39905 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 FLJ16779-201ENST00000612722 7638 ntBASIC14.46□□□□□ -0.09
GDNFP39905 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.46□□□□□ -0.09
GDNFP39905 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GDNFP39905 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.46□□□□□ -0.09
GDNFP39905 TP73-AS1-210ENST00000637775 1455 ntBASIC14.46□□□□□ -0.09
GDNFP39905 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.46□□□□□ -0.09
GDNFP39905 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.46□□□□□ -0.09
GDNFP39905 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.46□□□□□ -0.09
GDNFP39905 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.46□□□□□ -0.09
GDNFP39905 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.46□□□□□ -0.09
GDNFP39905 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 AC096582.2-201ENST00000510860 516 ntBASIC14.46□□□□□ -0.09
GDNFP39905 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.46□□□□□ -0.09
GDNFP39905 AC009533.2-201ENST00000543664 586 ntBASIC14.46□□□□□ -0.09
GDNFP39905 AC111152.3-201ENST00000569699 673 ntBASIC14.46□□□□□ -0.09
GDNFP39905 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.46□□□□□ -0.09
GDNFP39905 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.46□□□□□ -0.09
GDNFP39905 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.46□□□□□ -0.09
GDNFP39905 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.46□□□□□ -0.09
GDNFP39905 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDNFP39905 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.46□□□□□ -0.1
GDNFP39905 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.46□□□□□ -0.1
GDNFP39905 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms