Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.72■□□□□ 0.11
RORAP35398 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RORAP35398 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RORAP35398 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RORAP35398 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RORAP35398 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RORAP35398 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RORAP35398 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.71■□□□□ 0.11
RORAP35398 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RORAP35398 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.71■□□□□ 0.11
RORAP35398 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.71■□□□□ 0.11
RORAP35398 AC008677.1-201ENST00000519230 1561 ntBASIC15.71■□□□□ 0.11
RORAP35398 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.71■□□□□ 0.11
RORAP35398 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RORAP35398 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 AL513477.1-201ENST00000602865 2407 ntBASIC15.71■□□□□ 0.11
RORAP35398 SPDYE7P-202ENST00000420373 878 ntBASIC15.71■□□□□ 0.11
RORAP35398 AC142381.1-201ENST00000426099 345 ntBASIC15.71■□□□□ 0.11
RORAP35398 KLF2P3-201ENST00000451977 1087 ntBASIC15.71■□□□□ 0.11
RORAP35398 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 KRT18P34-201ENST00000488218 1270 ntBASIC15.71■□□□□ 0.11
RORAP35398 ALG1L8P-201ENST00000533887 760 ntBASIC15.71■□□□□ 0.11
RORAP35398 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.71■□□□□ 0.11
RORAP35398 AC073389.1-201ENST00000595595 795 ntBASIC15.71■□□□□ 0.11
RORAP35398 AC092364.2-202ENST00000597012 1073 ntBASIC15.71■□□□□ 0.11
RORAP35398 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.71■□□□□ 0.11
RORAP35398 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.71■□□□□ 0.11
RORAP35398 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RORAP35398 AC084018.2-201ENST00000613093 2607 ntBASIC15.71■□□□□ 0.11
RORAP35398 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
RORAP35398 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.71■□□□□ 0.1
RORAP35398 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RORAP35398 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RORAP35398 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
RORAP35398 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RORAP35398 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RORAP35398 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RORAP35398 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 PCDHB17P-201ENST00000539533 2393 ntBASIC15.7■□□□□ 0.1
RORAP35398 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RORAP35398 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RORAP35398 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RORAP35398 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.7■□□□□ 0.1
RORAP35398 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.7■□□□□ 0.1
RORAP35398 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.7■□□□□ 0.1
RORAP35398 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.7■□□□□ 0.1
RORAP35398 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 AC105233.2-201ENST00000523697 349 ntBASIC15.7■□□□□ 0.1
RORAP35398 AF228730.5-201ENST00000530288 346 ntBASIC15.7■□□□□ 0.1
RORAP35398 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.7■□□□□ 0.1
RORAP35398 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.7■□□□□ 0.1
RORAP35398 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.7■□□□□ 0.1
RORAP35398 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
RORAP35398 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RORAP35398 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.7■□□□□ 0.1
RORAP35398 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RORAP35398 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RORAP35398 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.69■□□□□ 0.1
RORAP35398 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms