Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.23□□□□□ -0.45
CKS2P33552 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 AL049757.1-201ENST00000616842 1596 ntBASIC12.23□□□□□ -0.45
CKS2P33552 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.23□□□□□ -0.45
CKS2P33552 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CKS2P33552 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.23□□□□□ -0.45
CKS2P33552 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 AC122714.2-201ENST00000502787 707 ntBASIC12.23□□□□□ -0.45
CKS2P33552 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
CKS2P33552 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.23□□□□□ -0.45
CKS2P33552 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 AC092666.2-201ENST00000613287 246 ntBASIC12.23□□□□□ -0.45
CKS2P33552 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.23□□□□□ -0.45
CKS2P33552 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CKS2P33552 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CKS2P33552 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.23□□□□□ -0.45
CKS2P33552 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS2P33552 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CKS2P33552 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 AC009336.1-201ENST00000608941 1553 ntBASIC12.22□□□□□ -0.45
CKS2P33552 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.22□□□□□ -0.45
CKS2P33552 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 KRT8P10-201ENST00000450021 1447 ntBASIC12.22□□□□□ -0.45
CKS2P33552 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.22□□□□□ -0.45
CKS2P33552 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 INGX-201ENST00000359239 846 ntBASIC12.22□□□□□ -0.45
CKS2P33552 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 FAM8A6P-201ENST00000407496 1135 ntBASIC12.22□□□□□ -0.45
CKS2P33552 HMGA1P5-201ENST00000412453 271 ntBASIC12.22□□□□□ -0.45
CKS2P33552 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.22□□□□□ -0.45
CKS2P33552 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.22□□□□□ -0.45
CKS2P33552 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.22□□□□□ -0.45
CKS2P33552 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.22□□□□□ -0.45
CKS2P33552 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.22□□□□□ -0.45
CKS2P33552 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.22□□□□□ -0.45
CKS2P33552 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CKS2P33552 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CKS2P33552 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms