Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 FAM21FP-201ENST00000426241 1131 ntBASIC19.49■□□□□ 0.71
COL4A5P29400 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A5P29400 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.49■□□□□ 0.71
COL4A5P29400 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.49■□□□□ 0.71
COL4A5P29400 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.49■□□□□ 0.71
COL4A5P29400 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL4A5P29400 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A5P29400 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A5P29400 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A5P29400 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A5P29400 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL4A5P29400 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL4A5P29400 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
COL4A5P29400 FAM86LP-201ENST00000478302 853 ntBASIC19.48■□□□□ 0.71
COL4A5P29400 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A5P29400 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A5P29400 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.48■□□□□ 0.71
COL4A5P29400 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.48■□□□□ 0.71
COL4A5P29400 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.48■□□□□ 0.71
COL4A5P29400 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A5P29400 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.48■□□□□ 0.71
COL4A5P29400 AC133539.2-201ENST00000604757 467 ntBASIC19.48■□□□□ 0.71
COL4A5P29400 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
COL4A5P29400 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.48■□□□□ 0.71
COL4A5P29400 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL4A5P29400 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL4A5P29400 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL4A5P29400 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL4A5P29400 NEFHP1-201ENST00000412845 2629 ntBASIC19.47■□□□□ 0.71
COL4A5P29400 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL4A5P29400 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A5P29400 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.47■□□□□ 0.71
COL4A5P29400 RPL13AP20-201ENST00000459725 609 ntBASIC19.47■□□□□ 0.71
COL4A5P29400 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A5P29400 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.47■□□□□ 0.71
COL4A5P29400 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.47■□□□□ 0.71
COL4A5P29400 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL4A5P29400 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL4A5P29400 PCGF3-213ENST00000620529 1899 ntBASIC19.47■□□□□ 0.71
COL4A5P29400 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL4A5P29400 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 AC026954.1-201ENST00000429771 1293 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 TARDBPP1-201ENST00000442013 1203 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 KRT90P-201ENST00000549264 1064 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.46■□□□□ 0.71
COL4A5P29400 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL4A5P29400 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.46■□□□□ 0.71
COL4A5P29400 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.46■□□□□ 0.71
COL4A5P29400 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL4A5P29400 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.46■□□□□ 0.71
COL4A5P29400 GPAA1P2-201ENST00000417923 928 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.46■□□□□ 0.71
COL4A5P29400 RHOQP1-201ENST00000555758 579 ntBASIC19.46■□□□□ 0.71
COL4A5P29400 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms