Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTGFP29279 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTGFP29279 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTGFP29279 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.35■□□□□ 0.53
CTGFP29279 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTGFP29279 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTGFP29279 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CTGFP29279 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTGFP29279 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 ELK2AP-201ENST00000392510 1007 ntBASIC18.34■□□□□ 0.53
CTGFP29279 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 AC026954.1-201ENST00000429771 1293 ntBASIC18.34■□□□□ 0.53
CTGFP29279 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.34■□□□□ 0.53
CTGFP29279 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.34■□□□□ 0.53
CTGFP29279 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.34■□□□□ 0.53
CTGFP29279 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.34■□□□□ 0.53
CTGFP29279 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.34■□□□□ 0.53
CTGFP29279 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.34■□□□□ 0.53
CTGFP29279 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 AC244669.2-201ENST00000612320 853 ntBASIC18.34■□□□□ 0.53
CTGFP29279 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTGFP29279 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTGFP29279 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.34■□□□□ 0.53
CTGFP29279 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 AC134043.2-201ENST00000624206 2238 ntBASIC18.34■□□□□ 0.53
CTGFP29279 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTGFP29279 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTGFP29279 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTGFP29279 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTGFP29279 PFN1P12-201ENST00000455938 534 ntBASIC18.33■□□□□ 0.52
CTGFP29279 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.33■□□□□ 0.52
CTGFP29279 AC124283.3-201ENST00000570869 594 ntBASIC18.33■□□□□ 0.52
CTGFP29279 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CTGFP29279 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.33■□□□□ 0.52
CTGFP29279 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTGFP29279 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTGFP29279 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTGFP29279 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTGFP29279 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTGFP29279 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CTGFP29279 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CTGFP29279 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTGFP29279 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.33■□□□□ 0.52
CTGFP29279 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
CTGFP29279 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.32■□□□□ 0.52
CTGFP29279 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.32■□□□□ 0.52
CTGFP29279 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTGFP29279 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.32■□□□□ 0.52
CTGFP29279 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.32■□□□□ 0.52
CTGFP29279 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.32■□□□□ 0.52
CTGFP29279 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 AC092506.1-202ENST00000401022 528 ntBASIC18.32■□□□□ 0.52
CTGFP29279 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CTGFP29279 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.32■□□□□ 0.52
CTGFP29279 FAM86LP-201ENST00000478302 853 ntBASIC18.32■□□□□ 0.52
CTGFP29279 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.32■□□□□ 0.52
CTGFP29279 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.32■□□□□ 0.52
CTGFP29279 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.32■□□□□ 0.52
CTGFP29279 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.32■□□□□ 0.52
CTGFP29279 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.32■□□□□ 0.52
CTGFP29279 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.32■□□□□ 0.52
CTGFP29279 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTGFP29279 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
CTGFP29279 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.32■□□□□ 0.52
CTGFP29279 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms