Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC112504.1-201ENST00000623415 1841 ntBASIC15.68■□□□□ 0.1
NCK1P16333 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 FLJ16779-201ENST00000612722 7638 ntBASIC15.68■□□□□ 0.1
NCK1P16333 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.68■□□□□ 0.1
NCK1P16333 TOP3BP1-201ENST00000420768 1380 ntBASIC15.68■□□□□ 0.1
NCK1P16333 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NCK1P16333 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.68■□□□□ 0.1
NCK1P16333 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.68■□□□□ 0.1
NCK1P16333 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.68■□□□□ 0.1
NCK1P16333 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
NCK1P16333 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NCK1P16333 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.68■□□□□ 0.1
NCK1P16333 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCK1P16333 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.68■□□□□ 0.1
NCK1P16333 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.67■□□□□ 0.1
NCK1P16333 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.67■□□□□ 0.1
NCK1P16333 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 KRT17P6-201ENST00000453795 1220 ntBASIC15.67■□□□□ 0.1
NCK1P16333 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.67■□□□□ 0.1
NCK1P16333 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 Z69720.1-201ENST00000601483 472 ntBASIC15.67■□□□□ 0.1
NCK1P16333 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 AL353135.1-201ENST00000606729 504 ntBASIC15.67■□□□□ 0.1
NCK1P16333 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.67■□□□□ 0.1
NCK1P16333 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 KRT8P39-201ENST00000396270 1433 ntBASIC15.67■□□□□ 0.1
NCK1P16333 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.67■□□□□ 0.1
NCK1P16333 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NCK1P16333 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCK1P16333 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms