Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 KRT18P64-201ENST00000434946 1219 ntBASIC20.78■□□□□ 0.92
ITGB4P16144 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.78■□□□□ 0.92
ITGB4P16144 AC108725.1-201ENST00000495472 409 ntBASIC20.78■□□□□ 0.92
ITGB4P16144 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.78■□□□□ 0.92
ITGB4P16144 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ITGB4P16144 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 AC139713.2-201ENST00000641328 2723 ntBASIC20.78■□□□□ 0.92
ITGB4P16144 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.78■□□□□ 0.92
ITGB4P16144 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 KRT8P22-201ENST00000562317 1415 ntBASIC20.78■□□□□ 0.92
ITGB4P16144 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGB4P16144 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ITGB4P16144 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.78■□□□□ 0.92
ITGB4P16144 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGB4P16144 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.77■□□□□ 0.92
ITGB4P16144 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
ITGB4P16144 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.77■□□□□ 0.92
ITGB4P16144 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ITGB4P16144 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC20.77■□□□□ 0.92
ITGB4P16144 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.77■□□□□ 0.92
ITGB4P16144 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 AC244669.2-201ENST00000612320 853 ntBASIC20.77■□□□□ 0.92
ITGB4P16144 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.77■□□□□ 0.92
ITGB4P16144 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.77■□□□□ 0.92
ITGB4P16144 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITGB4P16144 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ITGB4P16144 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ITGB4P16144 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ITGB4P16144 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.77■□□□□ 0.91
ITGB4P16144 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.76■□□□□ 0.91
ITGB4P16144 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGB4P16144 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGB4P16144 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.76■□□□□ 0.91
ITGB4P16144 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.76■□□□□ 0.91
ITGB4P16144 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 TUBB1P2-201ENST00000422712 1306 ntBASIC20.76■□□□□ 0.91
ITGB4P16144 TUBB1P1-201ENST00000503144 1300 ntBASIC20.76■□□□□ 0.91
ITGB4P16144 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGB4P16144 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.76■□□□□ 0.91
ITGB4P16144 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGB4P16144 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 AL583810.1-201ENST00000553344 1045 ntBASIC20.76■□□□□ 0.91
ITGB4P16144 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.76■□□□□ 0.91
ITGB4P16144 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.76■□□□□ 0.91
ITGB4P16144 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.76■□□□□ 0.91
ITGB4P16144 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.76■□□□□ 0.91
ITGB4P16144 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ITGB4P16144 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
ITGB4P16144 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
ITGB4P16144 AL645608.8-201ENST00000606034 2086 ntBASIC20.75■□□□□ 0.91
ITGB4P16144 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.75■□□□□ 0.91
ITGB4P16144 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ITGB4P16144 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ITGB4P16144 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ITGB4P16144 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.75■□□□□ 0.91
ITGB4P16144 MIR1247-201ENST00000408206 136 ntBASIC20.75■□□□□ 0.91
ITGB4P16144 AC074338.1-201ENST00000416825 156 ntBASIC20.75■□□□□ 0.91
ITGB4P16144 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.75■□□□□ 0.91
ITGB4P16144 RPL7P3-201ENST00000441388 714 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms