Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.11■□□□□ 0.49
CLTAP09496 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 RN7SL589P-201ENST00000481268 310 ntBASIC18.11■□□□□ 0.49
CLTAP09496 AP000344.2-201ENST00000512987 629 ntBASIC18.11■□□□□ 0.49
CLTAP09496 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.11■□□□□ 0.49
CLTAP09496 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.11■□□□□ 0.49
CLTAP09496 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.11■□□□□ 0.49
CLTAP09496 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.11■□□□□ 0.49
CLTAP09496 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.11■□□□□ 0.49
CLTAP09496 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.11■□□□□ 0.49
CLTAP09496 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.11■□□□□ 0.49
CLTAP09496 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CLTAP09496 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLTAP09496 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLTAP09496 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 AC008741.2-201ENST00000612792 3115 ntBASIC18.1■□□□□ 0.49
CLTAP09496 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 AL603756.1-201ENST00000606511 2163 ntBASIC18.1■□□□□ 0.49
CLTAP09496 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 CNN2P11-201ENST00000429351 262 ntBASIC18.1■□□□□ 0.49
CLTAP09496 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 SPDYE11-202ENST00000450699 704 ntBASIC18.1■□□□□ 0.49
CLTAP09496 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 KRT8P48-201ENST00000515599 1220 ntBASIC18.1■□□□□ 0.49
CLTAP09496 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 AL135744.1-201ENST00000565098 629 ntBASIC18.1■□□□□ 0.49
CLTAP09496 SPDYE9P-201ENST00000570642 692 ntBASIC18.1■□□□□ 0.49
CLTAP09496 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.1■□□□□ 0.49
CLTAP09496 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 AC022145.2-201ENST00000598203 171 ntBASIC18.1■□□□□ 0.49
CLTAP09496 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.1■□□□□ 0.49
CLTAP09496 SPDYE10P-202ENST00000612005 668 ntBASIC18.1■□□□□ 0.49
CLTAP09496 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.1■□□□□ 0.49
CLTAP09496 SPDYE8P-202ENST00000612377 668 ntBASIC18.1■□□□□ 0.49
CLTAP09496 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLTAP09496 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.1■□□□□ 0.49
CLTAP09496 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
CLTAP09496 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLTAP09496 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLTAP09496 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms