Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.28■□□□□ 0.36
SOD2P04179 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SOD2P04179 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SOD2P04179 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 AP006294.1-201ENST00000415407 339 ntBASIC17.28■□□□□ 0.36
SOD2P04179 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.28■□□□□ 0.36
SOD2P04179 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.28■□□□□ 0.36
SOD2P04179 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.28■□□□□ 0.36
SOD2P04179 AL359881.2-201ENST00000602973 570 ntBASIC17.28■□□□□ 0.36
SOD2P04179 CHCHD2P3-201ENST00000603038 451 ntBASIC17.28■□□□□ 0.36
SOD2P04179 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.28■□□□□ 0.36
SOD2P04179 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.28■□□□□ 0.36
SOD2P04179 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOD2P04179 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SOD2P04179 SLC7A15P-201ENST00000424028 1363 ntBASIC17.28■□□□□ 0.36
SOD2P04179 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.28■□□□□ 0.36
SOD2P04179 OR6D1P-202ENST00000641007 5290 ntBASIC17.27■□□□□ 0.36
SOD2P04179 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.27■□□□□ 0.36
SOD2P04179 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.27■□□□□ 0.36
SOD2P04179 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SOD2P04179 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SOD2P04179 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SOD2P04179 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 U91328.1-201ENST00000437528 223 ntBASIC17.27■□□□□ 0.36
SOD2P04179 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.27■□□□□ 0.36
SOD2P04179 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.27■□□□□ 0.36
SOD2P04179 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 AC055876.2-201ENST00000531834 546 ntBASIC17.27■□□□□ 0.36
SOD2P04179 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.27■□□□□ 0.36
SOD2P04179 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.27■□□□□ 0.36
SOD2P04179 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.27■□□□□ 0.36
SOD2P04179 AC004461.2-201ENST00000629517 803 ntBASIC17.27■□□□□ 0.36
SOD2P04179 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOD2P04179 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SOD2P04179 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SOD2P04179 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SOD2P04179 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SOD2P04179 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.27■□□□□ 0.35
SOD2P04179 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.27■□□□□ 0.35
SOD2P04179 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.27■□□□□ 0.35
SOD2P04179 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SOD2P04179 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOD2P04179 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.27■□□□□ 0.35
SOD2P04179 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SOD2P04179 LINC01144-201ENST00000626198 1710 ntBASIC17.27■□□□□ 0.35
SOD2P04179 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.27■□□□□ 0.35
SOD2P04179 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOD2P04179 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.26■□□□□ 0.35
SOD2P04179 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.26■□□□□ 0.35
SOD2P04179 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOD2P04179 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SOD2P04179 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SOD2P04179 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms