Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 AL023284.2-201ENST00000405850 579 ntBASIC13.3□□□□□ -0.28
APOC3P02656 LSM12P1-201ENST00000411836 588 ntBASIC13.3□□□□□ -0.28
APOC3P02656 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.3□□□□□ -0.28
APOC3P02656 AC131281.2-201ENST00000520478 145 ntBASIC13.3□□□□□ -0.28
APOC3P02656 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.3□□□□□ -0.28
APOC3P02656 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.3□□□□□ -0.28
APOC3P02656 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
APOC3P02656 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC3P02656 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC3P02656 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
APOC3P02656 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 AC009065.1-201ENST00000564055 1225 ntBASIC13.29□□□□□ -0.28
APOC3P02656 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 AC087481.3-201ENST00000602886 1894 ntBASIC13.29□□□□□ -0.28
APOC3P02656 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC3P02656 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC3P02656 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC3P02656 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC3P02656 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.28□□□□□ -0.28
APOC3P02656 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
APOC3P02656 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
APOC3P02656 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.28□□□□□ -0.28
APOC3P02656 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOC3P02656 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC3P02656 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms