Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT6AP02538 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.08■□□□□ 0.17
KRT6AP02538 GPAA1P2-202ENST00000606848 1787 ntBASIC16.08■□□□□ 0.17
KRT6AP02538 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT6AP02538 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT6AP02538 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
KRT6AP02538 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
KRT6AP02538 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 UNC93B7-201ENST00000509439 705 ntBASIC16.08■□□□□ 0.16
KRT6AP02538 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.08■□□□□ 0.16
KRT6AP02538 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.08■□□□□ 0.16
KRT6AP02538 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT6AP02538 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT6AP02538 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 LINC01144-201ENST00000626198 1710 ntBASIC16.08■□□□□ 0.16
KRT6AP02538 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT6AP02538 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT6AP02538 PCGF3-213ENST00000620529 1899 ntBASIC16.08■□□□□ 0.16
KRT6AP02538 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
KRT6AP02538 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 MRPL20P1-201ENST00000400819 433 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 DUSP5P1-201ENST00000441325 1139 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 AC018712.1-201ENST00000455767 687 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 POU5F1P6-201ENST00000466990 990 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT6AP02538 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT6AP02538 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT6AP02538 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
KRT6AP02538 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT6AP02538 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT6AP02538 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6AP02538 PCDHA1-201ENST00000378133 2726 ntBASIC16.07■□□□□ 0.16
KRT6AP02538 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
KRT6AP02538 FLJ16779-201ENST00000612722 7638 ntBASIC16.06■□□□□ 0.16
KRT6AP02538 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms