Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COL2A1P02458 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
COL2A1P02458 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL2A1P02458 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 AZGP1P1-201ENST00000411909 902 ntBASIC19.03■□□□□ 0.64
COL2A1P02458 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.03■□□□□ 0.64
COL2A1P02458 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.03■□□□□ 0.64
COL2A1P02458 AC123567.1-201ENST00000548294 1261 ntBASIC19.03■□□□□ 0.64
COL2A1P02458 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.03■□□□□ 0.64
COL2A1P02458 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.03■□□□□ 0.64
COL2A1P02458 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.03■□□□□ 0.64
COL2A1P02458 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.02■□□□□ 0.64
COL2A1P02458 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL2A1P02458 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
COL2A1P02458 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
COL2A1P02458 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.02■□□□□ 0.64
COL2A1P02458 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.02■□□□□ 0.64
COL2A1P02458 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL2A1P02458 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.02■□□□□ 0.64
COL2A1P02458 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
COL2A1P02458 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
COL2A1P02458 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL2A1P02458 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.02■□□□□ 0.64
COL2A1P02458 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL2A1P02458 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.02■□□□□ 0.63
COL2A1P02458 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
COL2A1P02458 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.02■□□□□ 0.63
COL2A1P02458 AC098850.1-201ENST00000419919 790 ntBASIC19.02■□□□□ 0.63
COL2A1P02458 ARSEP1-201ENST00000420443 635 ntBASIC19.02■□□□□ 0.63
COL2A1P02458 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.02■□□□□ 0.63
COL2A1P02458 GPR53P-205ENST00000457298 1084 ntBASIC19.02■□□□□ 0.63
COL2A1P02458 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.02■□□□□ 0.63
COL2A1P02458 AC106886.1-201ENST00000568660 600 ntBASIC19.02■□□□□ 0.63
COL2A1P02458 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
COL2A1P02458 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL2A1P02458 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.02■□□□□ 0.63
COL2A1P02458 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.02■□□□□ 0.63
COL2A1P02458 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
COL2A1P02458 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL2A1P02458 KRT8P37-201ENST00000451609 1420 ntBASIC19.01■□□□□ 0.63
COL2A1P02458 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.01■□□□□ 0.63
COL2A1P02458 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.01■□□□□ 0.63
COL2A1P02458 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.01■□□□□ 0.63
COL2A1P02458 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.01■□□□□ 0.63
COL2A1P02458 RPL13P2-201ENST00000440687 659 ntBASIC19.01■□□□□ 0.63
COL2A1P02458 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.01■□□□□ 0.63
COL2A1P02458 RN7SL837P-201ENST00000463010 287 ntBASIC19.01■□□□□ 0.63
COL2A1P02458 AC011495.1-201ENST00000498085 584 ntBASIC19.01■□□□□ 0.63
COL2A1P02458 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.01■□□□□ 0.63
COL2A1P02458 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
COL2A1P02458 RARRES2P5-201ENST00000564013 466 ntBASIC19.01■□□□□ 0.63
COL2A1P02458 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.01■□□□□ 0.63
COL2A1P02458 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.01■□□□□ 0.63
COL2A1P02458 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.01■□□□□ 0.63
COL2A1P02458 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL2A1P02458 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL2A1P02458 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL2A1P02458 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19■□□□□ 0.63
COL2A1P02458 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19■□□□□ 0.63
COL2A1P02458 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19■□□□□ 0.63
COL2A1P02458 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19■□□□□ 0.63
COL2A1P02458 RN7SL752P-201ENST00000463779 287 ntBASIC19■□□□□ 0.63
COL2A1P02458 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19■□□□□ 0.63
COL2A1P02458 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19■□□□□ 0.63
COL2A1P02458 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19■□□□□ 0.63
COL2A1P02458 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
COL2A1P02458 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms