Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TMCC1O94876 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TMCC1O94876 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMCC1O94876 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMCC1O94876 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.03■□□□□ 0.32
TMCC1O94876 HTR5BP-201ENST00000430851 1154 ntBASIC17.03■□□□□ 0.32
TMCC1O94876 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
TMCC1O94876 AC112482.1-201ENST00000492080 688 ntBASIC17.03■□□□□ 0.32
TMCC1O94876 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.03■□□□□ 0.32
TMCC1O94876 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.03■□□□□ 0.32
TMCC1O94876 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
TMCC1O94876 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.03■□□□□ 0.32
TMCC1O94876 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMCC1O94876 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.03■□□□□ 0.32
TMCC1O94876 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMCC1O94876 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC1O94876 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.02■□□□□ 0.32
TMCC1O94876 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC1O94876 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 AL671710.1-201ENST00000610245 2349 ntBASIC17.02■□□□□ 0.32
TMCC1O94876 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.02■□□□□ 0.32
TMCC1O94876 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.02■□□□□ 0.32
TMCC1O94876 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 MIR1233-2-201ENST00000408138 82 ntBASIC17.02■□□□□ 0.32
TMCC1O94876 MIR1233-1-201ENST00000408722 82 ntBASIC17.02■□□□□ 0.32
TMCC1O94876 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.02■□□□□ 0.32
TMCC1O94876 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC1O94876 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.02■□□□□ 0.32
TMCC1O94876 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.02■□□□□ 0.32
TMCC1O94876 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.02■□□□□ 0.32
TMCC1O94876 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC1O94876 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.02■□□□□ 0.32
TMCC1O94876 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 AC005829.1-201ENST00000570002 483 ntBASIC17.02■□□□□ 0.32
TMCC1O94876 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC1O94876 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.02■□□□□ 0.32
TMCC1O94876 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.02■□□□□ 0.32
TMCC1O94876 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMCC1O94876 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.02■□□□□ 0.32
TMCC1O94876 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.02■□□□□ 0.31
TMCC1O94876 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.02■□□□□ 0.31
TMCC1O94876 SNX33P1-201ENST00000592116 1762 ntBASIC17.02■□□□□ 0.31
TMCC1O94876 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMCC1O94876 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TMCC1O94876 RNF216P1-203ENST00000404404 2427 ntBASIC17.01■□□□□ 0.31
TMCC1O94876 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TMCC1O94876 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMCC1O94876 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms