Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LTN1O94822 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.52■■□□□ 1.04
LTN1O94822 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.52■■□□□ 1.04
LTN1O94822 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LTN1O94822 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LTN1O94822 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.52■■□□□ 1.04
LTN1O94822 AP001094.4-201ENST00000579008 2176 ntBASIC21.52■■□□□ 1.04
LTN1O94822 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LTN1O94822 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
LTN1O94822 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.52■■□□□ 1.04
LTN1O94822 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.52■■□□□ 1.04
LTN1O94822 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.52■■□□□ 1.04
LTN1O94822 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.52■■□□□ 1.04
LTN1O94822 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.52■■□□□ 1.04
LTN1O94822 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.52■■□□□ 1.04
LTN1O94822 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.52■■□□□ 1.04
LTN1O94822 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.52■■□□□ 1.04
LTN1O94822 AL606495.2-201ENST00000605867 535 ntBASIC21.52■■□□□ 1.04
LTN1O94822 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.52■■□□□ 1.04
LTN1O94822 MIR6775-201ENST00000617557 69 ntBASIC21.52■■□□□ 1.04
LTN1O94822 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.52■■□□□ 1.04
LTN1O94822 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LTN1O94822 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LTN1O94822 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.52■■□□□ 1.03
LTN1O94822 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LTN1O94822 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LTN1O94822 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LTN1O94822 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LTN1O94822 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 FAM86MP-201ENST00000340703 885 ntBASIC21.51■■□□□ 1.03
LTN1O94822 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 FO393414.2-201ENST00000405153 598 ntBASIC21.51■■□□□ 1.03
LTN1O94822 AL442647.2-201ENST00000429864 857 ntBASIC21.51■■□□□ 1.03
LTN1O94822 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.51■■□□□ 1.03
LTN1O94822 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 COX11-210ENST00000639671 696 ntBASIC21.51■■□□□ 1.03
LTN1O94822 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 UBALD1-205ENST00000590891 2641 ntBASIC21.51■■□□□ 1.03
LTN1O94822 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.51■■□□□ 1.03
LTN1O94822 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.51■■□□□ 1.03
LTN1O94822 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.51■■□□□ 1.03
LTN1O94822 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LTN1O94822 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.51■■□□□ 1.03
LTN1O94822 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.5■■□□□ 1.03
LTN1O94822 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.5■■□□□ 1.03
LTN1O94822 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LTN1O94822 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 KRT18P64-201ENST00000434946 1219 ntBASIC21.5■■□□□ 1.03
LTN1O94822 AC022210.1-201ENST00000449856 793 ntBASIC21.5■■□□□ 1.03
LTN1O94822 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.5■■□□□ 1.03
LTN1O94822 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.5■■□□□ 1.03
LTN1O94822 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.5■■□□□ 1.03
LTN1O94822 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.5■■□□□ 1.03
LTN1O94822 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.5■■□□□ 1.03
LTN1O94822 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.5■■□□□ 1.03
LTN1O94822 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC21.5■■□□□ 1.03
LTN1O94822 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LTN1O94822 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LTN1O94822 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
LTN1O94822 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LTN1O94822 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.49■■□□□ 1.03
LTN1O94822 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.49■■□□□ 1.03
LTN1O94822 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
LTN1O94822 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.49■■□□□ 1.03
LTN1O94822 BNIP3P42-201ENST00000454982 569 ntBASIC21.49■■□□□ 1.03
LTN1O94822 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.49■■□□□ 1.03
LTN1O94822 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 BNIP3P29-201ENST00000598302 571 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms