Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RNU1-129P-201ENST00000384064 167 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 KRT18P32-201ENST00000424695 1287 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 FAM86GP-201ENST00000448322 971 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 IGHV3-62-201ENST00000520057 340 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 AC243562.1-201ENST00000560672 389 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 U1.21-201ENST00000580816 167 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CPNE3O75131 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 KRT8P49-201ENST00000604166 1432 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CPNE3O75131 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE3O75131 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CPNE3O75131 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CPNE3O75131 AC131009.4-201ENST00000624048 1740 ntBASIC15.92■□□□□ 0.14
CPNE3O75131 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE3O75131 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 AC109322.1-201ENST00000524499 1264 ntBASIC15.92■□□□□ 0.14
CPNE3O75131 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CPNE3O75131 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE3O75131 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE3O75131 AC093520.2-201ENST00000561830 333 ntBASIC15.92■□□□□ 0.14
CPNE3O75131 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE3O75131 MPDU1-223ENST00000582151 728 ntBASIC15.92■□□□□ 0.14
CPNE3O75131 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE3O75131 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 FRMD8P1-201ENST00000440433 1524 ntBASIC15.92■□□□□ 0.14
CPNE3O75131 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CPNE3O75131 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CPNE3O75131 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.92■□□□□ 0.14
CPNE3O75131 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPNE3O75131 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.92■□□□□ 0.14
CPNE3O75131 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE3O75131 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms