Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.82■□□□□ 0.12
LCMT2O60294 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LCMT2O60294 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 OR6D1P-203ENST00000641209 4860 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.81■□□□□ 0.12
LCMT2O60294 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.81■□□□□ 0.12
LCMT2O60294 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 ACTG1P14-201ENST00000446382 1122 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
LCMT2O60294 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.81■□□□□ 0.12
LCMT2O60294 YBX1P5-201ENST00000509441 847 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 KRT8P48-201ENST00000515599 1220 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.81■□□□□ 0.12
LCMT2O60294 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.81■□□□□ 0.12
LCMT2O60294 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 AC243562.1-201ENST00000560672 389 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 AL135744.1-201ENST00000565098 629 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.81■□□□□ 0.12
LCMT2O60294 AL138918.1-201ENST00000568306 659 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.81■□□□□ 0.12
LCMT2O60294 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 AC055717.3-201ENST00000622967 595 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 LINC01144-201ENST00000626198 1710 ntBASIC15.81■□□□□ 0.12
LCMT2O60294 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.81■□□□□ 0.12
LCMT2O60294 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LCMT2O60294 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.81■□□□□ 0.12
LCMT2O60294 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LCMT2O60294 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 AKAP8P1-201ENST00000434743 1349 ntBASIC15.8■□□□□ 0.12
LCMT2O60294 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.8■□□□□ 0.12
LCMT2O60294 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.8■□□□□ 0.12
LCMT2O60294 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.8■□□□□ 0.12
LCMT2O60294 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 AC023511.2-201ENST00000618803 211 ntBASIC15.8■□□□□ 0.12
LCMT2O60294 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LCMT2O60294 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
LCMT2O60294 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms