Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PCDH7O60245 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
PCDH7O60245 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.84■□□□□ 0.13
PCDH7O60245 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH7O60245 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
PCDH7O60245 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDH7O60245 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PCDH7O60245 MIR4515-201ENST00000584082 81 ntBASIC15.84■□□□□ 0.13
PCDH7O60245 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDH7O60245 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDH7O60245 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH7O60245 LINC01144-201ENST00000626198 1710 ntBASIC15.84■□□□□ 0.13
PCDH7O60245 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH7O60245 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PCDH7O60245 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH7O60245 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH7O60245 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH7O60245 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH7O60245 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH7O60245 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH7O60245 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PCDH7O60245 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH7O60245 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH7O60245 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.83■□□□□ 0.13
PCDH7O60245 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDH7O60245 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDH7O60245 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 AL139384.1-201ENST00000612143 3047 ntBASIC15.83■□□□□ 0.12
PCDH7O60245 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 AC009947.1-201ENST00000444350 727 ntBASIC15.83■□□□□ 0.12
PCDH7O60245 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDH7O60245 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
PCDH7O60245 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 UNC93B6-202ENST00000528242 690 ntBASIC15.83■□□□□ 0.12
PCDH7O60245 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 AL662844.1-201ENST00000546340 181 ntBASIC15.83■□□□□ 0.12
PCDH7O60245 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 SLC25A6P4-201ENST00000586535 553 ntBASIC15.83■□□□□ 0.12
PCDH7O60245 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH7O60245 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH7O60245 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PCDH7O60245 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDH7O60245 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PCDH7O60245 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH7O60245 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDH7O60245 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH7O60245 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 VN2R19P-201ENST00000442399 1052 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms