Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 MIR940-201ENST00000401276 94 ntBASIC14.74□□□□□ -0.05
TRAF3IP2O43734 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 AC092474.2-201ENST00000424288 719 ntBASIC14.74□□□□□ -0.05
TRAF3IP2O43734 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 AP000347.1-202ENST00000435868 847 ntBASIC14.74□□□□□ -0.05
TRAF3IP2O43734 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 POLD2P1-201ENST00000511220 997 ntBASIC14.74□□□□□ -0.05
TRAF3IP2O43734 PGAM5P1-201ENST00000518923 814 ntBASIC14.74□□□□□ -0.05
TRAF3IP2O43734 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 AP002472.1-201ENST00000577490 586 ntBASIC14.74□□□□□ -0.05
TRAF3IP2O43734 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAF3IP2O43734 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 AC023274.1-201ENST00000418278 595 ntBASIC14.73□□□□□ -0.05
TRAF3IP2O43734 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
TRAF3IP2O43734 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 AC040169.1-201ENST00000565382 521 ntBASIC14.73□□□□□ -0.05
TRAF3IP2O43734 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 CYP2T1P-202ENST00000641596 2535 ntBASIC14.73□□□□□ -0.05
TRAF3IP2O43734 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 PCDH8P1-201ENST00000428983 2773 ntBASIC14.73□□□□□ -0.05
TRAF3IP2O43734 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAF3IP2O43734 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 AL078644.1-201ENST00000609881 752 ntBASIC14.72□□□□□ -0.05
TRAF3IP2O43734 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAF3IP2O43734 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms