Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.04■□□□□ 0.96
KCNQ3O43525 API5-211ENST00000534695 560 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNQ3O43525 AL596325.1-201ENST00000563991 1082 ntBASIC21.04■□□□□ 0.96
KCNQ3O43525 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNQ3O43525 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
KCNQ3O43525 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNQ3O43525 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.04■□□□□ 0.96
KCNQ3O43525 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNQ3O43525 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNQ3O43525 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KCNQ3O43525 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.03■□□□□ 0.96
KCNQ3O43525 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.03■□□□□ 0.96
KCNQ3O43525 GAPDHP21-201ENST00000450301 1010 ntBASIC21.03■□□□□ 0.96
KCNQ3O43525 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNQ3O43525 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 AC135586.1-201ENST00000539323 574 ntBASIC21.03■□□□□ 0.96
KCNQ3O43525 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 AC104794.3-201ENST00000566840 1248 ntBASIC21.03■□□□□ 0.96
KCNQ3O43525 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
KCNQ3O43525 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.03■□□□□ 0.96
KCNQ3O43525 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNQ3O43525 AC009053.2-201ENST00000563701 2365 ntBASIC21.03■□□□□ 0.96
KCNQ3O43525 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNQ3O43525 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNQ3O43525 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 U82695.1-201ENST00000635752 1889 ntBASIC21.03■□□□□ 0.96
KCNQ3O43525 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNQ3O43525 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNQ3O43525 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
KCNQ3O43525 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNQ3O43525 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 AL136982.4-201ENST00000437689 1740 ntBASIC21.02■□□□□ 0.96
KCNQ3O43525 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 SPDYE17-201ENST00000412399 783 ntBASIC21.02■□□□□ 0.96
KCNQ3O43525 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNQ3O43525 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KCNQ3O43525 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNQ3O43525 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNQ3O43525 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.02■□□□□ 0.96
KCNQ3O43525 AC024267.1-201ENST00000582320 895 ntBASIC21.02■□□□□ 0.96
KCNQ3O43525 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.02■□□□□ 0.96
KCNQ3O43525 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.02■□□□□ 0.96
KCNQ3O43525 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
KCNQ3O43525 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 FLJ38576-201ENST00000623820 2459 ntBASIC21.02■□□□□ 0.96
KCNQ3O43525 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNQ3O43525 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNQ3O43525 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KCNQ3O43525 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
KCNQ3O43525 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.02■□□□□ 0.95
KCNQ3O43525 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.02■□□□□ 0.95
KCNQ3O43525 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KCNQ3O43525 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 KRT8P12-202ENST00000472924 1397 ntBASIC21.01■□□□□ 0.95
KCNQ3O43525 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.01■□□□□ 0.95
KCNQ3O43525 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
KCNQ3O43525 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.01■□□□□ 0.95
KCNQ3O43525 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KCNQ3O43525 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
KCNQ3O43525 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.01■□□□□ 0.95
KCNQ3O43525 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.01■□□□□ 0.95
KCNQ3O43525 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.01■□□□□ 0.95
KCNQ3O43525 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms