Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TNRC18O15417 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNRC18O15417 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNRC18O15417 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNRC18O15417 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.53■□□□□ 0.4
TNRC18O15417 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.53■□□□□ 0.4
TNRC18O15417 AC012158.2-201ENST00000536546 354 ntBASIC17.53■□□□□ 0.4
TNRC18O15417 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNRC18O15417 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.53■□□□□ 0.4
TNRC18O15417 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TNRC18O15417 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNRC18O15417 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNRC18O15417 KRT8P35-201ENST00000483942 1338 ntBASIC17.53■□□□□ 0.4
TNRC18O15417 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.53■□□□□ 0.4
TNRC18O15417 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNRC18O15417 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNRC18O15417 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.52■□□□□ 0.4
TNRC18O15417 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.52■□□□□ 0.4
TNRC18O15417 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.52■□□□□ 0.4
TNRC18O15417 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNRC18O15417 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.52■□□□□ 0.4
TNRC18O15417 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNRC18O15417 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNRC18O15417 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNRC18O15417 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNRC18O15417 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TNRC18O15417 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.52■□□□□ 0.4
TNRC18O15417 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TNRC18O15417 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNRC18O15417 AL357373.1-201ENST00000394974 322 ntBASIC17.52■□□□□ 0.4
TNRC18O15417 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.52■□□□□ 0.4
TNRC18O15417 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.52■□□□□ 0.4
TNRC18O15417 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.52■□□□□ 0.4
TNRC18O15417 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.52■□□□□ 0.4
TNRC18O15417 AL161670.2-201ENST00000557650 1227 ntBASIC17.52■□□□□ 0.4
TNRC18O15417 PRSS30P-206ENST00000641773 873 ntBASIC17.52■□□□□ 0.4
TNRC18O15417 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNRC18O15417 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNRC18O15417 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.52■□□□□ 0.39
TNRC18O15417 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.52■□□□□ 0.39
TNRC18O15417 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNRC18O15417 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.52■□□□□ 0.39
TNRC18O15417 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNRC18O15417 RPL13AP25-201ENST00000484130 612 ntBASIC17.52■□□□□ 0.39
TNRC18O15417 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.52■□□□□ 0.39
TNRC18O15417 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.52■□□□□ 0.39
TNRC18O15417 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNRC18O15417 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.52■□□□□ 0.39
TNRC18O15417 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNRC18O15417 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNRC18O15417 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.52■□□□□ 0.39
TNRC18O15417 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
TNRC18O15417 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 C2orf69P1-201ENST00000563532 1093 ntBASIC17.51■□□□□ 0.39
TNRC18O15417 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.51■□□□□ 0.39
TNRC18O15417 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.51■□□□□ 0.39
TNRC18O15417 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.51■□□□□ 0.39
TNRC18O15417 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.51■□□□□ 0.39
TNRC18O15417 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 AC103988.2-201ENST00000561804 725 ntBASIC17.51■□□□□ 0.39
TNRC18O15417 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.51■□□□□ 0.39
TNRC18O15417 MIR4649-201ENST00000582839 64 ntBASIC17.51■□□□□ 0.39
TNRC18O15417 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 AC007787.1-201ENST00000588095 1583 ntBASIC17.51■□□□□ 0.39
TNRC18O15417 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNRC18O15417 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNRC18O15417 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TNRC18O15417 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNRC18O15417 SERBP1P2-201ENST00000436888 1164 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.5■□□□□ 0.39
TNRC18O15417 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.5■□□□□ 0.39
TNRC18O15417 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.5■□□□□ 0.39
TNRC18O15417 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNRC18O15417 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.5■□□□□ 0.39
TNRC18O15417 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNRC18O15417 PDIA3P2-201ENST00000428073 158 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
TNRC18O15417 FAM86KP-201ENST00000509817 987 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 AC005730.2-201ENST00000564549 1184 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 MIR6842-201ENST00000612539 65 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 AC018695.6-201ENST00000614011 534 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 PTPN20CP-201ENST00000614090 920 ntBASIC17.5■□□□□ 0.39
TNRC18O15417 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNRC18O15417 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TNRC18O15417 AL138709.1-201ENST00000614840 1693 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms