Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.72■■□□□ 1.07
APAF1O14727 FOXO1B-201ENST00000504678 1527 ntBASIC21.72■■□□□ 1.07
APAF1O14727 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
APAF1O14727 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.72■■□□□ 1.07
APAF1O14727 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.72■■□□□ 1.07
APAF1O14727 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
APAF1O14727 SPCS2P4-201ENST00000436160 681 ntBASIC21.72■■□□□ 1.07
APAF1O14727 TIMM8BP1-201ENST00000452384 211 ntBASIC21.72■■□□□ 1.07
APAF1O14727 POU5F1P6-201ENST00000466990 990 ntBASIC21.72■■□□□ 1.07
APAF1O14727 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.72■■□□□ 1.07
APAF1O14727 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.72■■□□□ 1.07
APAF1O14727 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.72■■□□□ 1.07
APAF1O14727 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.72■■□□□ 1.07
APAF1O14727 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 AC105339.1-204ENST00000636249 355 ntBASIC21.72■■□□□ 1.07
APAF1O14727 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
APAF1O14727 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.72■■□□□ 1.07
APAF1O14727 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.72■■□□□ 1.07
APAF1O14727 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
APAF1O14727 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APAF1O14727 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.72■■□□□ 1.07
APAF1O14727 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.71■■□□□ 1.07
APAF1O14727 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.71■■□□□ 1.07
APAF1O14727 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
APAF1O14727 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
APAF1O14727 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.71■■□□□ 1.07
APAF1O14727 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 FAM86C2P-203ENST00000528684 1004 ntBASIC21.71■■□□□ 1.07
APAF1O14727 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.71■■□□□ 1.07
APAF1O14727 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
APAF1O14727 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
APAF1O14727 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
APAF1O14727 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
APAF1O14727 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.71■■□□□ 1.07
APAF1O14727 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.7■■□□□ 1.07
APAF1O14727 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.7■■□□□ 1.06
APAF1O14727 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
APAF1O14727 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.7■■□□□ 1.06
APAF1O14727 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
APAF1O14727 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
APAF1O14727 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 KRT18P13-201ENST00000400056 1290 ntBASIC21.7■■□□□ 1.06
APAF1O14727 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.7■■□□□ 1.06
APAF1O14727 SPDYE11-202ENST00000450699 704 ntBASIC21.7■■□□□ 1.06
APAF1O14727 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.7■■□□□ 1.06
APAF1O14727 SPDYE9P-201ENST00000570642 692 ntBASIC21.7■■□□□ 1.06
APAF1O14727 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.7■■□□□ 1.06
APAF1O14727 SPDYE10P-202ENST00000612005 668 ntBASIC21.7■■□□□ 1.06
APAF1O14727 SPDYE8P-202ENST00000612377 668 ntBASIC21.7■■□□□ 1.06
APAF1O14727 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.7■■□□□ 1.06
APAF1O14727 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.7■■□□□ 1.06
APAF1O14727 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.7■■□□□ 1.06
APAF1O14727 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.7■■□□□ 1.06
APAF1O14727 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
APAF1O14727 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
APAF1O14727 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.7■■□□□ 1.06
APAF1O14727 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
APAF1O14727 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APAF1O14727 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms