Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC26.14■■□□□ 1.78
CHD1O14646 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC26.14■■□□□ 1.78
CHD1O14646 CYGB-203ENST00000589145 788 ntTSL 3 BASIC26.14■■□□□ 1.78
CHD1O14646 AC079336.7-201ENST00000623428 1078 ntBASIC26.14■■□□□ 1.78
CHD1O14646 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHD1O14646 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD1O14646 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD1O14646 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD1O14646 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC26.14■■□□□ 1.78
CHD1O14646 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC26.14■■□□□ 1.78
CHD1O14646 AGER-206ENST00000375070 1463 ntTSL 5 BASIC26.14■■□□□ 1.77
CHD1O14646 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC26.14■■□□□ 1.77
CHD1O14646 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC26.14■■□□□ 1.77
CHD1O14646 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC26.14■■□□□ 1.77
CHD1O14646 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD1O14646 FXR1-221ENST00000491674 365 ntTSL 2 BASIC26.14■■□□□ 1.77
CHD1O14646 AC023310.1-201ENST00000554836 735 ntBASIC26.14■■□□□ 1.77
CHD1O14646 PAM16-215ENST00000577031 548 ntTSL 4 BASIC26.14■■□□□ 1.77
CHD1O14646 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CHD1O14646 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CHD1O14646 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC26.13■■□□□ 1.77
CHD1O14646 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC26.13■■□□□ 1.77
CHD1O14646 RN7SL555P-201ENST00000584742 339 ntBASIC26.13■■□□□ 1.77
CHD1O14646 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC26.13■■□□□ 1.77
CHD1O14646 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC26.13■■□□□ 1.77
CHD1O14646 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC26.13■■□□□ 1.77
CHD1O14646 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD1O14646 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 EEF1DP6-201ENST00000449232 372 ntBASIC26.12■■□□□ 1.77
CHD1O14646 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC26.12■■□□□ 1.77
CHD1O14646 AC138649.2-201ENST00000615886 705 ntBASIC26.12■■□□□ 1.77
CHD1O14646 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
CHD1O14646 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC26.12■■□□□ 1.77
CHD1O14646 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD1O14646 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
CHD1O14646 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD1O14646 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 CYP46A4P-201ENST00000414953 267 ntBASIC26.11■■□□□ 1.77
CHD1O14646 AC016700.1-201ENST00000429424 312 ntBASIC26.11■■□□□ 1.77
CHD1O14646 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD1O14646 AC114501.1-201ENST00000445949 172 ntBASIC26.11■■□□□ 1.77
CHD1O14646 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD1O14646 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD1O14646 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD1O14646 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD1O14646 AL031731.1-201ENST00000642131 2094 ntBASIC26.11■■□□□ 1.77
CHD1O14646 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD1O14646 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD1O14646 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD1O14646 SPTLC1P5-201ENST00000450718 252 ntBASIC26.11■■□□□ 1.77
CHD1O14646 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD1O14646 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD1O14646 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC26.11■■□□□ 1.77
CHD1O14646 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC26.11■■□□□ 1.77
CHD1O14646 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD1O14646 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD1O14646 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD1O14646 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD1O14646 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC26.1■■□□□ 1.77
CHD1O14646 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD1O14646 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms