Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL513480.1-201ENST00000451731 511 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3B1O00203 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.74■□□□□ 0.27
AP3B1O00203 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 U1.21-201ENST00000580816 167 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.74■□□□□ 0.27
AP3B1O00203 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3B1O00203 AC148477.8-201ENST00000624298 468 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.74■□□□□ 0.27
AP3B1O00203 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 AC005052.1-201ENST00000625181 2492 ntBASIC16.74■□□□□ 0.27
AP3B1O00203 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP3B1O00203 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP3B1O00203 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3B1O00203 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.73■□□□□ 0.27
AP3B1O00203 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 AL031055.1-201ENST00000606362 631 ntBASIC16.73■□□□□ 0.27
AP3B1O00203 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 AL031008.1-201ENST00000619963 541 ntBASIC16.73■□□□□ 0.27
AP3B1O00203 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
AP3B1O00203 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
AP3B1O00203 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3B1O00203 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3B1O00203 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3B1O00203 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.72■□□□□ 0.27
AP3B1O00203 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.72■□□□□ 0.27
AP3B1O00203 U82695.1-201ENST00000635752 1889 ntBASIC16.72■□□□□ 0.27
AP3B1O00203 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP3B1O00203 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3B1O00203 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
AP3B1O00203 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3B1O00203 HMGA1P7-201ENST00000406908 502 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms