Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 KRT8P39-201ENST00000396270 1433 ntBASIC16.56■□□□□ 0.24
CFAP99D6REC4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.56■□□□□ 0.24
CFAP99D6REC4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 POLD2P1-201ENST00000511220 997 ntBASIC16.56■□□□□ 0.24
CFAP99D6REC4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.56■□□□□ 0.24
CFAP99D6REC4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 AC008741.2-201ENST00000612792 3115 ntBASIC16.56■□□□□ 0.24
CFAP99D6REC4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 RNF216P1-203ENST00000404404 2427 ntBASIC16.55■□□□□ 0.24
CFAP99D6REC4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 PMS2P7-201ENST00000506558 1336 ntBASIC16.55■□□□□ 0.24
CFAP99D6REC4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 HMGA1P7-201ENST00000406908 502 ntBASIC16.55■□□□□ 0.24
CFAP99D6REC4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 PDPK2P-202ENST00000562415 1191 ntBASIC16.55■□□□□ 0.24
CFAP99D6REC4 AC002347.1-201ENST00000569543 541 ntBASIC16.55■□□□□ 0.24
CFAP99D6REC4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.55■□□□□ 0.24
CFAP99D6REC4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CFAP99D6REC4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms