Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
YJEFN3A6XGL0 KRT18P28-201ENST00000453838 1332 ntBASIC17.21■□□□□ 0.34
YJEFN3A6XGL0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
YJEFN3A6XGL0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 TSEN15P1-201ENST00000423257 515 ntBASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
YJEFN3A6XGL0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 AL662844.4-201ENST00000606367 2838 ntBASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 HLA-J-203ENST00000494367 1087 ntBASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 AC109322.1-201ENST00000524499 1264 ntBASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.19■□□□□ 0.34
YJEFN3A6XGL0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YJEFN3A6XGL0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms